Last updated on 2026-11-14 00:50:02 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 5.94 | 225.42 | 231.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 3.99 | 153.70 | 157.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 158.89 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 156.85 | OK | |||
| r-devel-windows-x86_64 | 2.0.2 | 11.00 | 199.00 | 210.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 5.82 | 207.80 | 213.62 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 6.71 | 211.28 | 217.99 | OK | |
| r-release-macos-arm64 | 2.0.2 | 2.00 | 43.00 | 45.00 | OK | |
| r-release-macos-x86_64 | 2.0.2 | 5.00 | 264.00 | 269.00 | OK | |
| r-release-windows-x86_64 | 2.0.2 | 8.00 | 179.00 | 187.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | ERROR | ||||
| r-oldrel-macos-x86_64 | 2.0.2 | 5.00 | 275.00 | 280.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.2 | 11.00 | 236.00 | 247.00 | OK |
Version: 2.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [56s/31s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.7-3
lavaan is FREE software! Please report any bugs.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
Traceback:
17: 1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
doTryCatch(return(expr), name, parentenv, handler) 2:
lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 18: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, tryCatchOne(expr, names, parentenv, handlers[[1L]]) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 19: sampling_weights_type = swt_type)tryCatchList(expr, classes, parentenv, handlers)
3: 20: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, tryCatch(expr, error = function(e) { wls_v = wls_v, nacov = nacov) call <- conditionCall(e)
if (!is.null(call)) { 4: if (identical(call[[1L]], quote(doTryCatch))) lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, call <- sys.call(-4L) lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, dcall <- deparse(call, nlines = 1L) sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, prefix <- paste("Error in", dcall, ": ") ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]] 5: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, if (is.na(w)) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b") 6: if (w > LONG) eval(sc, parent.frame()) prefix <- paste0(prefix, "\n ")
} 7: else prefix <- "Error : "eval(sc, parent.frame()) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L])) 8: if (!silent && isTRUE(getOption("show.error.messages"))) {lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, cat(msg, file = outFile) std.lv = TRUE, warn = FALSE) .Internal(printDeferredWarnings())
9: }doTryCatch(return(expr), name, parentenv, handler) invisible(structure(msg, class = "try-error", condition = e))
})10:
tryCatchOne(expr, names, parentenv, handlers[[1L]])21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
11: 22: tryCatchList(expr, classes, parentenv, handlers)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
12: 23: tryCatch(expr, error = function(e) {FUN(X[[i]], ...) call <- conditionCall(e)
if (!is.null(call)) {24: if (identical(call[[1L]], quote(doTryCatch))) lapply(seq_len(cores), inner.do) call <- sys.call(-4L)
25: parallel::mclapply(1:rep, function(r) { dcall <- deparse(call, nlines = 1L) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, prefix <- paste("Error in", dcall, ": ") free1 = free, s = s, k = k, nf = nf) LONG <- 75L}, mc.cores = cores) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")26: if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) type = "b")
if (w > LONG) 27: prefix <- paste0(prefix, "\n ")eval(code, test_env) }
28: else prefix <- "Error : "eval(code, test_env) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L]))29: if (!silent && isTRUE(getOption("show.error.messages"))) {withCallingHandlers({ cat(msg, file = outFile) eval(code, test_env) .Internal(printDeferredWarnings()) new_expectations <- the$test_expectations > starting_expectations } invisible(structure(msg, class = "try-error", condition = e)) if (snapshot_skipped) { skip("On CRAN")}) }
else if (!new_expectations && skip_on_empty) {13: skip_empty() }try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {14: skip(paste0("{", e$package, "} is not installed."))generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, } free1 = free, s = s, k = k, nf = nf)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")15: }, skip = handle_skip, warning = handle_warning, message = handle_message, FUN(X[[i]], ...) error = handle_error, interrupt = handle_interrupt)
16: 30: lapply(X = S, FUN = FUN, ...)
doTryCatch(return(expr), name, parentenv, handler)17: doTryCatch(return(expr), name, parentenv, handler)
31: 18: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: 19: tryCatchList(expr, classes, parentenv, handlers)tryCatchList(expr, classes, parentenv, handlers)
33: 20: tryCatch(withCallingHandlers({tryCatch(expr, error = function(e) { eval(code, test_env) call <- conditionCall(e) new_expectations <- the$test_expectations > starting_expectations if (!is.null(call)) { if (snapshot_skipped) { if (identical(call[[1L]], quote(doTryCatch))) skip("On CRAN") call <- sys.call(-4L) } dcall <- deparse(call, nlines = 1L) else if (!new_expectations && skip_on_empty) { prefix <- paste("Error in", dcall, ": ") skip_empty() LONG <- 75L }}, expectation = handle_expectation, packageNotFoundError = function(e) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (on_cran()) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") skip(paste0("{", e$package, "} is not installed.")) } if (is.na(w)) }, snapshot_on_cran = function(cnd) { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], snapshot_skipped <<- TRUE type = "b") invokeRestart("muffle_cran_snapshot") if (w > LONG) }, skip = handle_skip, warning = handle_warning, message = handle_message, prefix <- paste0(prefix, "\n ") error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
}34: else prefix <- "Error : "doWithOneRestart(return(expr), restart) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L]))35: withOneRestart(expr, restarts[[1L]]) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)36: .Internal(printDeferredWarnings())withRestarts(tryCatch(withCallingHandlers({ } eval(code, test_env) invisible(structure(msg, class = "try-error", condition = e)) new_expectations <- the$test_expectations > starting_expectations}) if (snapshot_skipped) {
skip("On CRAN")21: }try(lapply(X = S, FUN = FUN, ...), silent = TRUE) else if (!new_expectations && skip_on_empty) {
skip_empty()22: }sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: }, expectation = handle_expectation, packageNotFoundError = function(e) {FUN(X[[i]], ...) if (on_cran()) {
24: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {lapply(seq_len(cores), inner.do) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")25: }, skip = handle_skip, warning = handle_warning, message = handle_message, parallel::mclapply(1:rep, function(r) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, end_test = function() { free1 = free, s = s, k = k, nf = nf) })}, mc.cores = cores)
37: 26: test_code(code, parent.frame())gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", 27: {eval(code, test_env) out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
expect_gt(FCO:::mardia(out$x)[1], 1)28: expect_gt(FCO:::mardia(out$x)[1], 1)eval(code, test_env) })
29: 39: withCallingHandlers({eval(code, test_env) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations40: if (snapshot_skipped) {eval(code, test_env) skip("On CRAN")
}41: else if (!new_expectations && skip_on_empty) {withCallingHandlers({ eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { } skip_empty()}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot") if (on_cran()) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) error = handle_error, interrupt = handle_interrupt) }}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE30: invokeRestart("muffle_cran_snapshot")doTryCatch(return(expr), name, parentenv, handler)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])42:
doTryCatch(return(expr), name, parentenv, handler)32:
tryCatchList(expr, classes, parentenv, handlers)43:
tryCatchOne(expr, names, parentenv, handlers[[1L]])33:
tryCatch(withCallingHandlers({44: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationstryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
skip("On CRAN")45: } else if (!new_expectations && skip_on_empty) {tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (snapshot_skipped) { if (on_cran()) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) } } else if (!new_expectations && skip_on_empty) {}, snapshot_on_cran = function(cnd) { skip_empty() snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }
}, snapshot_on_cran = function(cnd) {34: doWithOneRestart(return(expr), restart) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")35: }, skip = handle_skip, warning = handle_warning, message = handle_message, withOneRestart(expr, restarts[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
36: 46: withRestarts(tryCatch(withCallingHandlers({doWithOneRestart(return(expr), restart) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations47: if (snapshot_skipped) {withOneRestart(expr, restarts[[1L]]) skip("On CRAN")
}48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) else if (!new_expectations && skip_on_empty) { new_expectations <- the$test_expectations > starting_expectations skip_empty() if (snapshot_skipped) { } skip("On CRAN") }}, expectation = handle_expectation, packageNotFoundError = function(e) { else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip_empty() } skip(paste0("{", e$package, "} is not installed."))}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }, skip = handle_skip, warning = handle_warning, message = handle_message, end_test = function() { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }) end_test = function() { })
37: 49: test_code(code, parent.frame())test_code(code = exprs, env = env, reporter = get_reporter() %||%
StopReporter$new())38:
test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", 50: {source_file(path, env = env(env), desc = desc, shuffle = shuffle, out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) error_call = error_call) expect_gt(FCO:::mardia(out$x)[1], 1)
expect_gt(FCO:::mardia(out$x)[1], 1)51: })FUN(X[[i]], ...)
39: 52: eval(code, test_env)lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle,
error_call = error_call)40:
eval(code, test_env)53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])41:
55: withCallingHandlers({tryCatchList(expr, classes, parentenv, handlers) eval(code, test_env)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { new_expectations <- the$test_expectations > starting_expectations cat(conditionMessage(cnd), "\n") NULL if (snapshot_skipped) {}) skip("On CRAN")
}57: else if (!new_expectations && skip_on_empty) { skip_empty()with_reporter(reporters$multi, lapply(test_paths, test_one_file, } env = env, desc = desc, shuffle = shuffle, error_call = error_call))}, expectation = handle_expectation, packageNotFoundError = function(e) {
58: if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))test_files_serial(test_dir = test_dir, test_package = test_package, } test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, }, snapshot_on_cran = function(cnd) { env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, snapshot_skipped <<- TRUE desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 59: error = handle_error, interrupt = handle_interrupt)test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, 42: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, doTryCatch(return(expr), name, parentenv, handler)
load_package = load_package, parallel = parallel, shuffle = shuffle)43:
60: tryCatchOne(expr, names, parentenv, handlers[[1L]])test_dir("testthat", package = package, reporter = reporter,
..., load_package = "installed")44:
tryCatchList(expr, classes, parentenv, handlers)61:
test_check("FCO")45:
tryCatch(withCallingHandlers({An irrecoverable exception occurred. R is aborting now ...
eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) {
Traceback:
cat(msg, file = outFile) 1: .Internal(printDeferredWarnings())lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) }
invisible(structure(msg, class = "try-error", condition = e)) 2: })lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx,
fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, 21: slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 22: sampling_weights_type = swt_type)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
3: 23: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, FUN(X[[i]], ...) wls_v = wls_v, nacov = nacov)
24: 4: lapply(seq_len(cores), inner.do)
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, 25: parallel::mclapply(1:rep, function(r) { lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, free1 = free, s = s, k = k, nf = nf) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)}, mc.cores = cores)
5: 26: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")gen_fit(mod1 = mod, x = bb1992, rep = 10)
6: 27: eval(sc, parent.frame())eval(code, test_env)
7: 28: eval(sc, parent.frame())
eval(code, test_env) 8:
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 29: std.lv = TRUE, warn = FALSE)withCallingHandlers({
eval(code, test_env) 9: new_expectations <- the$test_expectations > starting_expectationsdoTryCatch(return(expr), name, parentenv, handler) if (snapshot_skipped) { skip("On CRAN")
} else if (!new_expectations && skip_on_empty) {10: tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip_empty() }
}, expectation = handle_expectation, packageNotFoundError = function(e) {11: if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers)
skip(paste0("{", e$package, "} is not installed."))12: }tryCatch(expr, error = function(e) {}, snapshot_on_cran = function(cnd) { call <- conditionCall(e) snapshot_skipped <<- TRUE if (!is.null(call)) { invokeRestart("muffle_cran_snapshot") if (identical(call[[1L]], quote(doTryCatch))) }, skip = handle_skip, warning = handle_warning, message = handle_message, call <- sys.call(-4L) error = handle_error, interrupt = handle_interrupt) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")30: LONG <- 75LdoTryCatch(return(expr), name, parentenv, handler) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 31: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], tryCatchOne(expr, names, parentenv, handlers[[1L]]) type = "b")
32: if (w > LONG) tryCatchList(expr, classes, parentenv, handlers) prefix <- paste0(prefix, "\n ")
} else prefix <- "Error : "33: msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))tryCatch(withCallingHandlers({ if (!silent && isTRUE(getOption("show.error.messages"))) { eval(code, test_env) cat(msg, file = outFile) new_expectations <- the$test_expectations > starting_expectations .Internal(printDeferredWarnings()) if (snapshot_skipped) { } invisible(structure(msg, class = "try-error", condition = e)) skip("On CRAN")}) }
else if (!new_expectations && skip_on_empty) { skip_empty()13: }try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, }, expectation = handle_expectation, packageNotFoundError = function(e) { std.lv = TRUE, warn = FALSE), silent = TRUE) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))14: }generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE15: invokeRestart("muffle_cran_snapshot")FUN(X[[i]], ...)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)16: lapply(X = S, FUN = FUN, ...)
34:
doWithOneRestart(return(expr), restart)
17: 35: doTryCatch(return(expr), name, parentenv, handler)withOneRestart(expr, restarts[[1L]])
18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])36:
withRestarts(tryCatch(withCallingHandlers({19: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationstryCatchList(expr, classes, parentenv, handlers)
if (snapshot_skipped) {20: skip("On CRAN")tryCatch(expr, error = function(e) { } call <- conditionCall(e) else if (!new_expectations && skip_on_empty) { if (!is.null(call)) { skip_empty() if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) } dcall <- deparse(call, nlines = 1L)}, expectation = handle_expectation, packageNotFoundError = function(e) { prefix <- paste("Error in", dcall, ": ") if (on_cran()) { LONG <- 75L skip(paste0("{", e$package, "} is not installed.")) sm <- strsplit(conditionMessage(e), "\n")[[1L]] } w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}, snapshot_on_cran = function(cnd) { if (is.na(w)) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], }, skip = handle_skip, warning = handle_warning, message = handle_message, type = "b") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), if (w > LONG) end_test = function() { prefix <- paste0(prefix, "\n ") }) }
else prefix <- "Error : "37: msg <- paste0(prefix, conditionMessage(e), "\n")test_code(code, parent.frame()) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {38: cat(msg, file = outFile)test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) .Internal(printDeferredWarnings()) } out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) invisible(structure(msg, class = "try-error", condition = e)) expect_equal(out1$seed, out2$seed)})})
21: 39: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)eval(code, test_env)
22: 40: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))eval(code, test_env)
23: FUN(X[[i]], ...)41:
withCallingHandlers({24: eval(code, test_env)lapply(seq_len(cores), inner.do) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {25: skip("On CRAN") }parallel::mclapply(1:rep, function(r) { else if (!new_expectations && skip_on_empty) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, skip_empty() free1 = free, s = s, k = k, nf = nf) }}, mc.cores = cores)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))26: }gen_fit(mod1 = mod, x = bb1992, rep = 10)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE27: invokeRestart("muffle_cran_snapshot")eval(code, test_env)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)28:
eval(code, test_env)42:
doTryCatch(return(expr), name, parentenv, handler)29:
withCallingHandlers({43: tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations44: tryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
skip("On CRAN")45: }tryCatch(withCallingHandlers({ else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) { else if (!new_expectations && skip_on_empty) { snapshot_skipped <<- TRUE skip_empty() invokeRestart("muffle_cran_snapshot") }}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {30: skip(paste0("{", e$package, "} is not installed."))doTryCatch(return(expr), name, parentenv, handler) }
}, snapshot_on_cran = function(cnd) {31: snapshot_skipped <<- TRUEtryCatchOne(expr, names, parentenv, handlers[[1L]])
invokeRestart("muffle_cran_snapshot")32: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchList(expr, classes, parentenv, handlers) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
33: 46: tryCatch(withCallingHandlers({doWithOneRestart(return(expr), restart) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations47: if (snapshot_skipped) {withOneRestart(expr, restarts[[1L]]) skip("On CRAN")
}48: else if (!new_expectations && skip_on_empty) {withRestarts(tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (snapshot_skipped) { if (on_cran()) { skip("On CRAN") skip(paste0("{", e$package, "} is not installed.")) } } else if (!new_expectations && skip_on_empty) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE skip_empty() } invokeRestart("muffle_cran_snapshot")}, expectation = handle_expectation, packageNotFoundError = function(e) {}, skip = handle_skip, warning = handle_warning, message = handle_message, if (on_cran()) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) skip(paste0("{", e$package, "} is not installed."))
}34: }, snapshot_on_cran = function(cnd) {doWithOneRestart(return(expr), restart) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")35: }, skip = handle_skip, warning = handle_warning, message = handle_message, withOneRestart(expr, restarts[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {36: })
withRestarts(tryCatch(withCallingHandlers({49: eval(code, test_env)test_code(code = exprs, env = env, reporter = get_reporter() %||% new_expectations <- the$test_expectations > starting_expectations StopReporter$new()) if (snapshot_skipped) {
skip("On CRAN")50: }source_file(path, env = env(env), desc = desc, shuffle = shuffle, else if (!new_expectations && skip_on_empty) { error_call = error_call) skip_empty()
}51: }, expectation = handle_expectation, packageNotFoundError = function(e) {FUN(X[[i]], ...) if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
52: }lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")53: doTryCatch(return(expr), name, parentenv, handler)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal), 54: end_test = function() {tryCatchOne(expr, names, parentenv, handlers[[1L]]) })
37: 55: test_code(code, parent.frame())tryCatchList(expr, classes, parentenv, handlers)
56: 38: tryCatch(code, testthat_abort_reporter = function(cnd) {test_that("Is the seed set properly?", { cat(conditionMessage(cnd), "\n") out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) NULL out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})})
57: 39: with_reporter(reporters$multi, lapply(test_paths, test_one_file, eval(code, test_env) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
40: 58: eval(code, test_env)test_files_serial(test_dir = test_dir, test_package = test_package,
test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, 41: env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, withCallingHandlers({ desc = desc, load_package = load_package, shuffle = shuffle, eval(code, test_env) error_call = error_call) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {59: skip("On CRAN")test_files(test_dir = path, test_paths = test_paths, test_package = package, } reporter = reporter, load_helpers = load_helpers, env = env, else if (!new_expectations && skip_on_empty) { stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle) skip_empty()
}60: test_dir("testthat", package = package, reporter = reporter, }, expectation = handle_expectation, packageNotFoundError = function(e) { ..., load_package = "installed") if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
}61: test_check("FCO")}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")An irrecoverable exception occurred. R is aborting now ...
}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({
Traceback:
1: eval(code, test_env)lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) { 2: skip("On CRAN")lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, } fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, else if (!new_expectations && skip_on_empty) { unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], skip_empty() sampling_weights_type = swt_type) }
}, expectation = handle_expectation, packageNotFoundError = function(e) { 3: if (on_cran()) {lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, skip(paste0("{", e$package, "} is not installed.")) wls_v = wls_v, nacov = nacov) }
4: }, snapshot_on_cran = function(cnd) {lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, snapshot_skipped <<- TRUE lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, invokeRestart("muffle_cran_snapshot") sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, }, skip = handle_skip, warning = handle_warning, message = handle_message, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) error = handle_error, interrupt = handle_interrupt)
5: 30: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, doTryCatch(return(expr), name, parentenv, handler) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: 31: tryCatchOne(expr, names, parentenv, handlers[[1L]])eval(sc, parent.frame())
32: 7: eval(sc, parent.frame())tryCatchList(expr, classes, parentenv, handlers)
8: 33: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatch(withCallingHandlers({ std.lv = TRUE, warn = FALSE) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations 9: if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler)
skip("On CRAN")10: } else if (!new_expectations && skip_on_empty) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip_empty()
11: }tryCatchList(expr, classes, parentenv, handlers)}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))12: }tryCatch(expr, error = function(e) {}, snapshot_on_cran = function(cnd) { call <- conditionCall(e) snapshot_skipped <<- TRUE if (!is.null(call)) { invokeRestart("muffle_cran_snapshot") if (identical(call[[1L]], quote(doTryCatch))) }, skip = handle_skip, warning = handle_warning, message = handle_message, call <- sys.call(-4L) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")34: LONG <- 75LdoWithOneRestart(return(expr), restart) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")35: if (is.na(w)) withOneRestart(expr, restarts[[1L]]) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b")36: if (w > LONG) withRestarts(tryCatch(withCallingHandlers({ prefix <- paste0(prefix, "\n ") eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations else prefix <- "Error : " if (snapshot_skipped) { msg <- paste0(prefix, conditionMessage(e), "\n") skip("On CRAN") .Internal(seterrmessage(msg[1L])) } if (!silent && isTRUE(getOption("show.error.messages"))) { else if (!new_expectations && skip_on_empty) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) skip_empty() } } invisible(structure(msg, class = "try-error", condition = e))}, expectation = handle_expectation, packageNotFoundError = function(e) {}) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))13: }try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, }, snapshot_on_cran = function(cnd) { std.lv = TRUE, warn = FALSE), silent = TRUE) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")14: }, skip = handle_skip, warning = handle_warning, message = handle_message, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), free1 = free, s = s, k = k, nf = nf) end_test = function() {
})15:
FUN(X[[i]], ...)37:
test_code(code, parent.frame())16:
lapply(X = S, FUN = FUN, ...)38:
test_that("Is the seed set properly?", {17: out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)doTryCatch(return(expr), name, parentenv, handler) expect_equal(out1$seed, out2$seed)
})18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])39:
eval(code, test_env)19:
40: tryCatchList(expr, classes, parentenv, handlers)
eval(code, test_env)20:
tryCatch(expr, error = function(e) {41: call <- conditionCall(e)withCallingHandlers({ if (!is.null(call)) { eval(code, test_env) if (identical(call[[1L]], quote(doTryCatch))) new_expectations <- the$test_expectations > starting_expectations call <- sys.call(-4L) if (snapshot_skipped) { dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") skip("On CRAN") LONG <- 75L } sm <- strsplit(conditionMessage(e), "\n")[[1L]] else if (!new_expectations && skip_on_empty) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") skip_empty() if (is.na(w)) } w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (w > LONG) if (on_cran()) { prefix <- paste0(prefix, "\n ") skip(paste0("{", e$package, "} is not installed.")) } } else prefix <- "Error : "}, snapshot_on_cran = function(cnd) { msg <- paste0(prefix, conditionMessage(e), "\n") snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") .Internal(seterrmessage(msg[1L]))}, skip = handle_skip, warning = handle_warning, message = handle_message, if (!silent && isTRUE(getOption("show.error.messages"))) { error = handle_error, interrupt = handle_interrupt) cat(msg, file = outFile)
.Internal(printDeferredWarnings())42: doTryCatch(return(expr), name, parentenv, handler) }
43: invisible(structure(msg, class = "try-error", condition = e))tryCatchOne(expr, names, parentenv, handlers[[1L]])})
44: 21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)tryCatchList(expr, classes, parentenv, handlers)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))45:
tryCatch(withCallingHandlers({23: eval(code, test_env)FUN(X[[i]], ...) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {24: skip("On CRAN")lapply(seq_len(cores), inner.do) }
else if (!new_expectations && skip_on_empty) {25: skip_empty()parallel::mclapply(1:rep, function(r) { } generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, }, expectation = handle_expectation, packageNotFoundError = function(e) { free1 = free, s = s, k = k, nf = nf) if (on_cran()) {}, mc.cores = cores) skip(paste0("{", e$package, "} is not installed."))
}26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE27: invokeRestart("muffle_cran_snapshot")eval(code, test_env)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
28: 46: eval(code, test_env)doWithOneRestart(return(expr), restart)
29: 47: withOneRestart(expr, restarts[[1L]])withCallingHandlers({
eval(code, test_env)48: new_expectations <- the$test_expectations > starting_expectationswithRestarts(tryCatch(withCallingHandlers({ if (snapshot_skipped) { eval(code, test_env) skip("On CRAN") new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) { else if (!new_expectations && skip_on_empty) { skip("On CRAN") skip_empty() } } else if (!new_expectations && skip_on_empty) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip_empty() if (on_cran()) { }}, expectation = handle_expectation, packageNotFoundError = function(e) { skip(paste0("{", e$package, "} is not installed.")) if (on_cran()) { }}, snapshot_on_cran = function(cnd) { skip(paste0("{", e$package, "} is not installed.")) snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, snapshot_on_cran = function(cnd) {}, skip = handle_skip, warning = handle_warning, message = handle_message, snapshot_skipped <<- TRUE error = handle_error, interrupt = handle_interrupt) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 30: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {doTryCatch(return(expr), name, parentenv, handler) })
49: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())tryCatchOne(expr, names, parentenv, handlers[[1L]])
50: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, tryCatchList(expr, classes, parentenv, handlers) error_call = error_call)
33: 51: FUN(X[[i]], ...)tryCatch(withCallingHandlers({
eval(code, test_env)52: new_expectations <- the$test_expectations > starting_expectationslapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, if (snapshot_skipped) { skip("On CRAN") error_call = error_call) }
else if (!new_expectations && skip_on_empty) {53: skip_empty()doTryCatch(return(expr), name, parentenv, handler) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {54: if (on_cran()) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip(paste0("{", e$package, "} is not installed."))
}55: }, snapshot_on_cran = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
56: invokeRestart("muffle_cran_snapshot")tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")}, skip = handle_skip, warning = handle_warning, message = handle_message, NULL error = handle_error, interrupt = handle_interrupt), error = handle_fatal)})
34: 57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, doWithOneRestart(return(expr), restart) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
35: 58: withOneRestart(expr, restarts[[1L]])test_files_serial(test_dir = test_dir, test_package = test_package,
test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 36: desc = desc, load_package = load_package, shuffle = shuffle, withRestarts(tryCatch(withCallingHandlers({ error_call = error_call) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations59: if (snapshot_skipped) {test_files(test_dir = path, test_paths = test_paths, test_package = package, skip("On CRAN") reporter = reporter, load_helpers = load_helpers, env = env, } stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, else if (!new_expectations && skip_on_empty) { load_package = load_package, parallel = parallel, shuffle = shuffle) skip_empty()
}60: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }test_dir("testthat", package = package, reporter = reporter, }, snapshot_on_cran = function(cnd) { ..., load_package = "installed") snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")61: }, skip = handle_skip, warning = handle_warning, message = handle_message, test_check("FCO") error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {An irrecoverable exception occurred. R is aborting now ...
})
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
Traceback:
40: 1: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
41: 2: doTryCatch(return(expr), name, parentenv, handler)
lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 42: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, tryCatchOne(expr, names, parentenv, handlers[[1L]]) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 43: sampling_weights_type = swt_type)tryCatchList(expr, classes, parentenv, handlers)
44: 3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, tryCatch(code, testthat_abort_reporter = function(cnd) { wls_v = wls_v, nacov = nacov) cat(conditionMessage(cnd), "\n")
NULL}) 4:
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, 45: lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, with_reporter(reporters$multi, lapply(test_paths, test_one_file, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, env = env, desc = desc, shuffle = shuffle, error_call = error_call)) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
46: 5: test_files_serial(test_dir = test_dir, test_package = test_package, lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
6: desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)eval(sc, parent.frame())
47: 7: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, eval(sc, parent.frame()) load_package = load_package, parallel = parallel, shuffle = shuffle)
8: 48: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, test_dir("testthat", package = package, reporter = reporter, std.lv = TRUE, warn = FALSE) ..., load_package = "installed")
9: doTryCatch(return(expr), name, parentenv, handler)49:
test_check("FCO")
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])An irrecoverable exception occurred. R is aborting now ...
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx,
Traceback:
fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, 1: slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
sampling_weights_type = swt_type) 2:
lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 3: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, wls_v = wls_v, nacov = nacov) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
sampling_weights_type = swt_type)
4: 3: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) wls_v = wls_v, nacov = nacov)
5:
lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, 4: std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata,
6: lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, eval(sc, parent.frame()) sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs,
ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) 7: eval(sc, parent.frame())
8: 5: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: 9: eval(sc, parent.frame())doTryCatch(return(expr), name, parentenv, handler)
10: 7: tryCatchOne(expr, names, parentenv, handlers[[1L]])
eval(sc, parent.frame())11:
tryCatchList(expr, classes, parentenv, handlers)
8: 12: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatch(expr, error = function(e) { call <- conditionCall(e) std.lv = TRUE, warn = FALSE) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 9: call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)doTryCatch(return(expr), name, parentenv, handler) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L10: sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 11: type = "b")tryCatchList(expr, classes, parentenv, handlers) if (w > LONG) prefix <- paste0(prefix, "\n ")
}12: else prefix <- "Error : "tryCatch(expr, error = function(e) { msg <- paste0(prefix, conditionMessage(e), "\n") call <- conditionCall(e) .Internal(seterrmessage(msg[1L])) if (!is.null(call)) { if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) if (identical(call[[1L]], quote(doTryCatch))) .Internal(printDeferredWarnings()) call <- sys.call(-4L) } dcall <- deparse(call, nlines = 1L) invisible(structure(msg, class = "try-error", condition = e)) prefix <- paste("Error in", dcall, ": ")}) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")13: if (is.na(w)) try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")
if (w > LONG) prefix <- paste0(prefix, "\n ")14: }generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, else prefix <- "Error : " free1 = free1, free2 = free2, s = s, k = k, nf = nf) msg <- paste0(prefix, conditionMessage(e), "\n")
15: FUN(X[[i]], ...) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {16: cat(msg, file = outFile)lapply(X = S, FUN = FUN, ...) .Internal(printDeferredWarnings())
} invisible(structure(msg, class = "try-error", condition = e))17: })doTryCatch(return(expr), name, parentenv, handler)
13: 18: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, tryCatchOne(expr, names, parentenv, handlers[[1L]]) std.lv = TRUE, warn = FALSE), silent = TRUE)
14: 19: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, tryCatchList(expr, classes, parentenv, handlers) free1 = free1, free2 = free2, s = s, k = k, nf = nf)
20: 15: tryCatch(expr, error = function(e) {FUN(X[[i]], ...) call <- conditionCall(e)
if (!is.null(call)) {16: lapply(X = S, FUN = FUN, ...)
if (identical(call[[1L]], quote(doTryCatch))) 17: call <- sys.call(-4L)doTryCatch(return(expr), name, parentenv, handler) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")18: LONG <- 75LtryCatchOne(expr, names, parentenv, handlers[[1L]]) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 19: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], tryCatchList(expr, classes, parentenv, handlers) type = "b")
if (w > LONG) 20: prefix <- paste0(prefix, "\n ")tryCatch(expr, error = function(e) { } call <- conditionCall(e) else prefix <- "Error : " if (!is.null(call)) { msg <- paste0(prefix, conditionMessage(e), "\n") if (identical(call[[1L]], quote(doTryCatch))) .Internal(seterrmessage(msg[1L])) call <- sys.call(-4L) if (!silent && isTRUE(getOption("show.error.messages"))) { dcall <- deparse(call, nlines = 1L) cat(msg, file = outFile) prefix <- paste("Error in", dcall, ": ") .Internal(printDeferredWarnings()) } LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] invisible(structure(msg, class = "try-error", condition = e)) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}) if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 21: type = "b") if (w > LONG) try(lapply(X = S, FUN = FUN, ...), silent = TRUE) prefix <- paste0(prefix, "\n ")
}22: else prefix <- "Error : "sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
msg <- paste0(prefix, conditionMessage(e), "\n")23: .Internal(seterrmessage(msg[1L]))FUN(X[[i]], ...) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile) .Internal(printDeferredWarnings())24: }lapply(seq_len(cores), inner.do) invisible(structure(msg, class = "try-error", condition = e))
})25: parallel::mclapply(1:rep, function(r) {
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, 21: free1 = free1, free2 = free2, s = s, k = k, nf = nf)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)}, mc.cores = cores)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))26:
gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)23:
FUN(X[[i]], ...)27:
eval(code, test_env)24:
lapply(seq_len(cores), inner.do)28:
eval(code, test_env)25:
parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)29: }, mc.cores = cores)withCallingHandlers({
eval(code, test_env)26: new_expectations <- the$test_expectations > starting_expectationsgen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) if (snapshot_skipped) {
skip("On CRAN")27: eval(code, test_env) }
else if (!new_expectations && skip_on_empty) {28: skip_empty()eval(code, test_env) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {29: if (on_cran()) {withCallingHandlers({ skip(paste0("{", e$package, "} is not installed.")) eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, snapshot_on_cran = function(cnd) { if (snapshot_skipped) { snapshot_skipped <<- TRUE skip("On CRAN") invokeRestart("muffle_cran_snapshot") } else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip_empty() error = handle_error, interrupt = handle_interrupt) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {30: if (on_cran()) {doTryCatch(return(expr), name, parentenv, handler) skip(paste0("{", e$package, "} is not installed."))
}31: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUEtryCatchOne(expr, names, parentenv, handlers[[1L]]) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)32:
tryCatchList(expr, classes, parentenv, handlers)
33: 30: tryCatch(withCallingHandlers({doTryCatch(return(expr), name, parentenv, handler) eval(code, test_env)
31: new_expectations <- the$test_expectations > starting_expectationstryCatchOne(expr, names, parentenv, handlers[[1L]]) if (snapshot_skipped) {
skip("On CRAN")32: }tryCatchList(expr, classes, parentenv, handlers) else if (!new_expectations && skip_on_empty) {
skip_empty()33: }tryCatch(withCallingHandlers({}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) if (on_cran()) { new_expectations <- the$test_expectations > starting_expectations skip(paste0("{", e$package, "} is not installed.")) } if (snapshot_skipped) { skip("On CRAN")}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {34: skip(paste0("{", e$package, "} is not installed."))doWithOneRestart(return(expr), restart) }
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE35: invokeRestart("muffle_cran_snapshot")withOneRestart(expr, restarts[[1L]])}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)36:
34: withRestarts(tryCatch(withCallingHandlers({doWithOneRestart(return(expr), restart) eval(code, test_env)
35: new_expectations <- the$test_expectations > starting_expectationswithOneRestart(expr, restarts[[1L]]) if (snapshot_skipped) {
skip("On CRAN")36: }withRestarts(tryCatch(withCallingHandlers({ else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { } skip_empty()}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, if (on_cran()) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), skip(paste0("{", e$package, "} is not installed.")) end_test = function() { } })
}, snapshot_on_cran = function(cnd) {37: snapshot_skipped <<- TRUEtest_code(code = exprs, env = env, reporter = get_reporter() %||% invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), StopReporter$new()) end_test = function() {
38: })source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)
37: 39: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
FUN(X[[i]], ...)38:
source_file(path, env = env(env), desc = desc, shuffle = shuffle, 40: error_call = error_call)lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
39: 41: FUN(X[[i]], ...)doTryCatch(return(expr), name, parentenv, handler)
40: 42: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, tryCatchOne(expr, names, parentenv, handlers[[1L]]) error_call = error_call)
43: 41: tryCatchList(expr, classes, parentenv, handlers)doTryCatch(return(expr), name, parentenv, handler)
42: 44: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatch(code, testthat_abort_reporter = function(cnd) {
cat(conditionMessage(cnd), "\n")43: NULLtryCatchList(expr, classes, parentenv, handlers)})
44:
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, tryCatch(code, testthat_abort_reporter = function(cnd) { env = env, desc = desc, shuffle = shuffle, error_call = error_call)) cat(conditionMessage(cnd), "\n")
NULL46: })test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter,
env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 45: desc = desc, load_package = load_package, shuffle = shuffle, with_reporter(reporters$multi, lapply(test_paths, test_one_file, error_call = error_call) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
47: 46: test_files(test_dir = path, test_paths = test_paths, test_package = package, test_files_serial(test_dir = test_dir, test_package = test_package, reporter = reporter, load_helpers = load_helpers, env = env, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle) desc = desc, load_package = load_package, shuffle = shuffle,
error_call = error_call)48:
test_dir("testthat", package = package, reporter = reporter, 47: ..., load_package = "installed")test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, 49: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)test_check("FCO")
48: An irrecoverable exception occurred. R is aborting now ...
test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
*** caught segfault ***
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], address 0x110, cause 'invalid permissions'
sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
Traceback:
1: 33: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)tryCatch(withCallingHandlers({
2: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectationslav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, if (snapshot_skipped) { slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, skip("On CRAN") unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], } sampling_weights_type = swt_type)
else if (!new_expectations && skip_on_empty) { 3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, skip_empty() wls_v = wls_v, nacov = nacov) }}, expectation = handle_expectation, packageNotFoundError = function(e) {
4: if (on_cran()) {lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, skip(paste0("{", e$package, "} is not installed.")) lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, } sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") 5: }, skip = handle_skip, warning = handle_warning, message = handle_message, lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
34: 6: doWithOneRestart(return(expr), restart)eval(sc, parent.frame())
35: 7: withOneRestart(expr, restarts[[1L]])eval(sc, parent.frame())
36: 8: withRestarts(tryCatch(withCallingHandlers({lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, eval(code, test_env) std.lv = TRUE, warn = FALSE) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) { 9: skip("On CRAN")doTryCatch(return(expr), name, parentenv, handler) }
else if (!new_expectations && skip_on_empty) {10: skip_empty()tryCatchOne(expr, names, parentenv, handlers[[1L]])
}11: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchList(expr, classes, parentenv, handlers) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))12: }tryCatch(expr, error = function(e) {}, snapshot_on_cran = function(cnd) { call <- conditionCall(e) snapshot_skipped <<- TRUE if (!is.null(call)) { invokeRestart("muffle_cran_snapshot") if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)}, skip = handle_skip, warning = handle_warning, message = handle_message, dcall <- deparse(call, nlines = 1L) error = handle_error, interrupt = handle_interrupt), error = handle_fatal), prefix <- paste("Error in", dcall, ": ") end_test = function() { LONG <- 75L }) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")37: if (is.na(w)) test_code(code = exprs, env = env, reporter = get_reporter() %||% w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], StopReporter$new()) type = "b")
if (w > LONG) 38: prefix <- paste0(prefix, "\n ")source_file(path, env = env(env), desc = desc, shuffle = shuffle, } error_call = error_call) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")39: .Internal(seterrmessage(msg[1L]))FUN(X[[i]], ...) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)40: .Internal(printDeferredWarnings())lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, } invisible(structure(msg, class = "try-error", condition = e)) error_call = error_call)})
41:
doTryCatch(return(expr), name, parentenv, handler)13:
try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)42:
tryCatchOne(expr, names, parentenv, handlers[[1L]])14:
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, 43: free1 = free, s = s, k = k, nf = nf)tryCatchList(expr, classes, parentenv, handlers)
15: FUN(X[[i]], ...)
44: 16: tryCatch(code, testthat_abort_reporter = function(cnd) {lapply(X = S, FUN = FUN, ...) cat(conditionMessage(cnd), "\n")
NULL17: })doTryCatch(return(expr), name, parentenv, handler)
45: 18: with_reporter(reporters$multi, lapply(test_paths, test_one_file, tryCatchOne(expr, names, parentenv, handlers[[1L]]) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
19: 46: tryCatchList(expr, classes, parentenv, handlers)
test_files_serial(test_dir = test_dir, test_package = test_package, 20: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, tryCatch(expr, error = function(e) { call <- conditionCall(e) desc = desc, load_package = load_package, shuffle = shuffle, if (!is.null(call)) { error_call = error_call) if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)47: dcall <- deparse(call, nlines = 1L)test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, prefix <- paste("Error in", dcall, ": ") stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, LONG <- 75L load_package = load_package, parallel = parallel, shuffle = shuffle) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")48: if (is.na(w)) test_dir("testthat", package = package, reporter = reporter, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], ..., load_package = "installed") type = "b")
if (w > LONG) 49: prefix <- paste0(prefix, "\n ")test_check("FCO") } else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")An irrecoverable exception occurred. R is aborting now ...
.Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env)
Traceback:
1: new_expectations <- the$test_expectations > starting_expectationslav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
if (snapshot_skipped) { 2: skip("On CRAN")lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, } else if (!new_expectations && skip_on_empty) { slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, skip_empty() unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], } sampling_weights_type = swt_type)
3: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, skip(paste0("{", e$package, "} is not installed.")) wls_v = wls_v, nacov = nacov) }}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE 4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, error = handle_error, interrupt = handle_interrupt) sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs,
ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
30: 5: doTryCatch(return(expr), name, parentenv, handler)lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")31:
tryCatchOne(expr, names, parentenv, handlers[[1L]]) 6:
32: tryCatchList(expr, classes, parentenv, handlers)
eval(sc, parent.frame())33:
tryCatch(withCallingHandlers({ eval(code, test_env) 7: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {eval(sc, parent.frame()) skip("On CRAN")
} 8: else if (!new_expectations && skip_on_empty) {lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, skip_empty() } std.lv = TRUE, warn = FALSE)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) { 9: skip(paste0("{", e$package, "} is not installed.")) }doTryCatch(return(expr), name, parentenv, handler)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")10: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchOne(expr, names, parentenv, handlers[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: 11: doWithOneRestart(return(expr), restart)tryCatchList(expr, classes, parentenv, handlers)
35: 12: withOneRestart(expr, restarts[[1L]])tryCatch(expr, error = function(e) {
call <- conditionCall(e)36: if (!is.null(call)) {withRestarts(tryCatch(withCallingHandlers({ if (identical(call[[1L]], quote(doTryCatch))) eval(code, test_env) call <- sys.call(-4L) new_expectations <- the$test_expectations > starting_expectations dcall <- deparse(call, nlines = 1L) if (snapshot_skipped) { skip("On CRAN") prefix <- paste("Error in", dcall, ": ") } LONG <- 75L else if (!new_expectations && skip_on_empty) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] skip_empty() w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") } if (is.na(w)) }, expectation = handle_expectation, packageNotFoundError = function(e) { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (on_cran()) { type = "b") skip(paste0("{", e$package, "} is not installed.")) if (w > LONG) } prefix <- paste0(prefix, "\n ")}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE else prefix <- "Error : " invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, msg <- paste0(prefix, conditionMessage(e), "\n") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { .Internal(seterrmessage(msg[1L])) }) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)37: test_code(code = exprs, env = env, reporter = get_reporter() %||% .Internal(printDeferredWarnings()) StopReporter$new()) }
invisible(structure(msg, class = "try-error", condition = e))38: })source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)13:
try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)39:
14: FUN(X[[i]], ...)generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1,
free1 = free1, free2 = free2, s = s, k = k, nf = nf)40:
lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)15: FUN(X[[i]], ...)
16: 41: lapply(X = S, FUN = FUN, ...)doTryCatch(return(expr), name, parentenv, handler)
17: doTryCatch(return(expr), name, parentenv, handler)42:
tryCatchOne(expr, names, parentenv, handlers[[1L]])18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])43:
tryCatchList(expr, classes, parentenv, handlers)19:
tryCatchList(expr, classes, parentenv, handlers)44:
tryCatch(code, testthat_abort_reporter = function(cnd) {20: cat(conditionMessage(cnd), "\n")tryCatch(expr, error = function(e) { NULL call <- conditionCall(e)}) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 45: call <- sys.call(-4L)with_reporter(reporters$multi, lapply(test_paths, test_one_file, dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") env = env, desc = desc, shuffle = shuffle, error_call = error_call)) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]]46: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")test_files_serial(test_dir = test_dir, test_package = test_package, if (is.na(w)) test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, type = "b") desc = desc, load_package = load_package, shuffle = shuffle, if (w > LONG) error_call = error_call) prefix <- paste0(prefix, "\n ")
47: }test_files(test_dir = path, test_paths = test_paths, test_package = package, else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") reporter = reporter, load_helpers = load_helpers, env = env, .Internal(seterrmessage(msg[1L])) stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, if (!silent && isTRUE(getOption("show.error.messages"))) { load_package = load_package, parallel = parallel, shuffle = shuffle) cat(msg, file = outFile)
.Internal(printDeferredWarnings()) }48: invisible(structure(msg, class = "try-error", condition = e))test_dir("testthat", package = package, reporter = reporter, }) ..., load_package = "installed")
49: 21: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : "
*** caught segfault ***
msg <- paste0(prefix, conditionMessage(e), "\n")address 0x110, cause 'invalid permissions'
.Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64